Table 1 Information on the PRV reference strains used for phylogenetic tree construction
From: Analysis of the recombination and evolution of the new type mutant pseudorabies virus XJ5 in China
Strains | GenBank accession number | Year isolation | Origin | Reference |
|---|---|---|---|---|
BJ-YT | KC981239.1 | 2012 | China | [49] |
TJ | KJ789182.1 | 2012 | China | [7] |
ZJ01 | KM061380.1 | 2012 | China | [50] |
HNX | KM189912.1 | 2012 | China | [8] |
Fa | KM189913.1 | 1980s | China | [9] |
HNB | KM189914.3 | 2012 | China | [10] |
HeN1 | KP098534.1 | 2012 | China | [11] |
JS-2012 | KP257591.1 | 2012 | China | [11] |
HN1201 | KP722022.1 | 2012 | China | [12] |
SC | KT809429.1 | 1986 | China | [51] |
HLJ8 | KT824771.1 | 2013 | China | [51] |
Qihe547 | KU056477.1 | 2014 | China | [52] |
Ea | KU315430.1 | 1990 | China | [2] |
DL14-08 | KU360259.1 | 2014 | China | [53] |
LA | KU552118.1 | 1997 | China | |
Ea(Hubei) | KX423960.1 | 1993 | China | [56] |
GD0304 | MH582511.1 | 2015 | China | Â |
HLJ-2013 | MK080279.1 | 2013 | China | [57] |
AnH1-CHN2015 | MK618718.1 | 2015 | China | [58] |
JX-CH-2016 | MK806387.1 | 2016 | China | [59] |
JSY7 | MT150583.1 | 2018 | China | [48] |
JSY13 | MT157263.1 | 2018 | China | [48] |
GD-YH | MT197597.1 | 2014 | China | [60] |
HuBXY-2018 | MT468549.1 | 2018 | China | [13] |
hSD-1-2019 | MT468550.1 | 2019 | China | [13] |
HeNLH-2017 | MT775883.1 | 2017 | China | [61] |
GD1802 | MT949535.1 | 2020 | China | [62] |
SD18 | MT949536.1 | 2020 | China | [62] |
HuB17 | MT949537.1 | 2020 | China | [62] |
XJ5 | OP512542 | 2015 | China | isolated by our laboratory |
Hercules | KT983810.1 | 2010 | Greece | [63] |
Kolchis | KT983811.1 | 2010 | Greece | [63] |
Kaplan | JF797218.1 | 1979 | Hungary | [47] |
Kaplan | JQ809328.1 | 2011 | Hungary | [64] |
DUL34gfp | JQ809329.1 | 2011 | Hungary | [64]mutant derived from Kaplan strain; contains UL34 deletion; [64]expresses GFP |
DUL34Pass | JQ809330.1 | 2011 | Hungary | derived from DUL34gfp strain after passaging in cell culture approx. 100 times to regain replication competence; UL34 deletion mutant |
Kaplan | KJ717942.1 | 1959 | Hungary | [65] |
PRV-MdBio | LT934125.1 | 2017 | Hungary | [66] |
ADV32751-Italy2014 | KU198433.1 | 2014 | Italy | [67] |
MY-1 | AP018925.1 | 2015 | Japan | [68] |
RC1 | LC342744.1 | 2016 | Japan | [69] |
NIA3 | KU900059.1 | 1971 | Spain | [70] |
Bartha | JF797217.1 | 1961 | Hungary | |
Becker | JF797219.1 | 1967 | USA | [47] |