Fig. 2
Allele frequency distributions, allele count distribution and allelic richness. A Minor allele frequency distribution of SNPs. All bars combined represent SNPs included in the SNPMAC3 dataset. Light gray bars represent the SNPs that are also included in the SNPMAC15 dataset; B Allele frequency distribution of haplotype alleles. All bars combined represent alleles included in the HaplotypeMAC3 dataset. Light gray bars represent the alleles that are also included in the HaplotypeMAC15 dataset; C Distribution of number of SNPs per GBS locus in SNPMAC3 and SNPMAC15. The numbers of loci are indicated on the bars; D Distribution of number of haplotype alleles per GBS locus in HaplotypeMAC3 and HaplotypeMAC15. The numbers of polymorphic haplotype loci are indicated on the bars; E Allelic richness in each sampling location measured in datasets HaplotypeMAC3 and HaplotypeMAC15. Whiskers represent 95% confidence intervals of the AR, acquired by bootstrapping over loci (20,000 bootstraps). The number of individuals sampled from each location (n) are indicated with gray bars