Fig. 3
From: Detecting complex infections in trypanosomatids using whole genome sequencing
Overall complexity estimation in Trypanosomatids field isolates. (A) Complexity estimations in each sample from each species. Each box corresponds to a clade. From top to bottom: L. braziliensis, L. donovani, T. brucei, T. cruzi. Each dot corresponds to a complex (circles), potential complex (diamond) or non-complex (triangles) isolates. The X and Y axis represents, respectively, the CI and proportion of the evaluated chromosomes that had a CI ≥ 0.1. The colour corresponds to the proportion of chromosomes that were evaluated in the isolate. The vertical dotted lines represent complexity cutoffs, and are coloured in accordance to the species from whom they were estimated. The red vertical line is the global complexity cutoff of 0.1, which separates the potential complex from the complex isolates. (B-E) AARD distribution from the complex (red) and potential complex (orange) isolates. From top to bottom: L. braziliensis; L. donovani; T. brucei; T. cruzi. The distribution of the simulated clone is represented in white. The AARD density plot for all isolates from each population can be seen in the Supplementary Fig. 8 to 11, Additional File 9