Whole-genome sequencing of extended spectrum beta lactamases (ESBLs)-producing Klebsiella pneumoniae (kp) isolates from selected hospitals in Malaysia

Table 3 Summary of phenotypic and genotypic characteristics of ESBL-producing kp isolates

Isolates	Cell morphology	Gram Status	Hospital Name	Sample types	Samples source	Plasmid replicons	MLST
1	Rod-shaped	-ve	HSAAS	Fresh Clinical Sample	Sputum	FIBK_1_Kpn3_JN233704_92*	985
12	Rod-shaped	-ve	HSAAS	Fresh Clinical Sample	Blood	FIAHI1_1_HI1_AF250878_80, FIIK_2_CP000966_pKp91_67, FII_1_pKP91_CP000966_17*?,	NF
16	Rod-shaped	-ve	HSAAS	Fresh Clinical Sample	Urine	ColRNAI_1_DQ298019, FIAHI1_1_HI1_AF250878_80, FIBK_1_Kpn3_JN233704_92, _FIIK_1_CP000648, FII_1_pKP91_CP000966_17*, R 1 DQ449578	11
2	Rod-shaped	-ve	HSAAS	Fresh Clinical Sample	Sputum	FIBK_1_Kpn3_JN233704_92*,	NF^*
6	Rod-shapedq	-ve	HSAAS	Fresh Clinical Sample	Urine	ColRNAI_1_DQ298019, _FIIK_1_CP000648, FII_1_pKP91_CP000966_17*?	17
B13	Rod-shaped	-ve	HPSF	Archived Clinical Sample	Urine	FIBK_1_Kpn3_JN233704_92, FIBpQil_1_pQil_JN233705_318, _FIIK_1_CP000648, FII_1_pKP91_CP000966_17*, _Q1_1_HE654726	394

Key: ID = Identity, (?) is used to indicate uncertainty in alleles called, (*) is used to indicate imprecise matches in alleles called, “NF” is used to indicate allele combinations not found in the MLST database, HSAAS = Hospital Sultan Abdul Aziz Shah, HPSF = Hospital Pakar Sultanah Fatimah, MLST = Multilocus Sequence Typing, - = not available, -ve = negative

ISSN: 1471-2164