Table 3 Most significant mQTLs associated with methylation at cg26698820 and cg19592637
CpG info | mQTL results | Most significant mQTL | |||||||
|---|---|---|---|---|---|---|---|---|---|
CpG | Chr | Gene | Number of cis-mQTL | Number of trans- mQTL | SNP (AL/MA)* | Chr | Gene | Effect (SE) | p-value |
cg26698820 | 20 | VSX1 | 99 | 0 | rs55651034 (A > C) | 20 | VSX1 | 0.22 (0.02) | 5.34 × 10− 26 |
cg19592637 | 20 | VSX1 | 29 | 1 | rs6076315 (G > A) | 20 | N/A | 0.16 (0.03) | 7.35 × 10− 9 |