Leveraging genomic insights from the neglected malaria parasites P. malariae and P. ovale using selective whole genome amplification (SWGA) approach

Table 2 Sequencing statistics for P. ovale curtisi isolates before and after SWGA

Sample name	Total number of reads sequenced (150 bp)	Reads aligned to P. ovale curtisi (PocGH01) reference (%)	Theoretical genome coverage (x)	Mean genome Coverage (x)	% callable (covered by > 10 reads)
POC1	47,271,694	0.21	0.45	0.51	0.01
SWGA_POC1	26,603,702	9.46	18.35	20.22	74.27
POC2	100,082,740	0.47	2.15	3.55	0.3
SWGA_POC2	29,124,412	9.24	21.14	23.82	79.54
POC3	57,271,046	0.41	1.06	2.23	0.03
SWGA_POC3	26,099,406	21.76	33.61	34.61	75.77
POC4	75,704,426	0.78	2.66	2.98	0.75
SWGA_POC4	60,385,902	7.79	27.21	28.98	77.18
POC5	59,916,118	0.50	1.37	2.31	0.06
SWGA_POC5	53,131,962	13.05	31.14	33.45	75.18
POC6	43,805,496	1.22	2.42	3.42.	0.87
SWGA_POC6	55,131,962	25.15	62.52	65.62	91.80
POC7	7,646,670	0.44	0.15	0.19	0.98
SWGA_POC7	53,052,348	16.16	38.67	40.35	87.99
POC8	97,298,808	0.49	2.16	2.69	0.27
SWGA_POC8	57,631,328	10.62	27.59	29.12	83.54

ISSN: 1471-2164