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Fig. 3 | BMC Genomics

Fig. 3

From: Time-course RNA-seq analysis of upland cotton (Gossypium hirsutum L.) responses to Southern root-knot nematode (Meloidogyne incognita) during compatible and incompatible interactions

Fig. 3

Venn diagrams of common DEGs during compatible and incompatible interactions at different DAI. Diagrams show a. downregulated genes in C201, b. upregulated genes in C201, c. downregulated genes in M120 and d. upregulated genes in M120, each at different days after inoculation (DAI). ‘C’ and ‘M’ correspond to C201 and M120, respectively. Numbers following ‘C’ and ‘M’ correspond to different DAI. ‘Up’ and ‘Down’ correspond to upregulated and downregulated. For DEGs common between two different DAI, significance threshold was kept at (FDR < 0.05) given that at least one of the occurrences is also significant at 4-log2 FC.

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BMC Genomics

ISSN: 1471-2164

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