Table 1 The average values of the nine metrics
From: CacPred: a cascaded convolutional neural network for TF-DNA binding prediction
Model | Precision | Recall | F1_score | ACC | Specificity | MCC | AUC | PRC | AEMR |
|---|---|---|---|---|---|---|---|---|---|
TBiNet | 0.74 + 0.02 | 0.77 ± 0.03 | 0.75 ± 0.03 | 0.76 ± 0.03 | 0.81 ± 0.06 | 0.55 ± 0.05 | 0.85 ± 0.02 | 0.80 ± 0.02 | 1.46 ± 0.1 |
DeepBind | 0.79 ± 0.01 | 0.79 ± 0.01 | 0.79 ± 0.02 | 0.78 ± 0.01 | 0.83 ± 0.04 | 0.58 ± 0.03 | 0.87 ± 0.02 | 0.85 ± 0.02 | 1.51 ± 0.09 |
DESSO | 0.71 ± 0.02 | 0.71 ± 0.02 | 0.70 ± 0.01 | 0.71 ± 0.01 | 0.72 ± 0.03 | 0.42 ± 0.03 | 0.79 ± 0.02 | 0.81 ± 0.02 | 1.32 ± 0.05 |
Basset | 0.84 ± 0.01 | 0.84 ± 0.01 | 0.84 ± 0.01 | 0.84 ± 0.01 | 0.84 ± 0.03 | 0.68 ± 0.02 | 0.92 ± 0.01 | 0.91 ± 0.01 | 1.73 ± 0.06 |
DeeperBind | 0.79 ± 0.01 | 0.77 ± 0.02 | 0.77 ± 0.02 | 0.77 ± 0.02 | 0.76 ± 0.1 | 0.56 ± 0.03 | 0.88 ± 0.02 | 0.80 ± 0.02 | 1.45 ± 0.11 |
DeepHistone | 0.92 ± 0.04 | 0.91 ± 0.03 | 0.91 ± 0.03 | 0.91 ± 0.04 | 0.94 ± 0.06 | 0.83 ± 0.07 | 0.96 ± 0.02 | 0.96 ± 0.02 | 2.08 ± 0.1 |
CacPred | 0.98 ± 0.02 | 0.98 ± 0.01 | 0.97 ± 0.01 | 0.96 ± 0.02 | 0.98 ± 0.01 | 0.97 ± 0.03 | 0.98 ± 0.01 | 0.97 ± 0.03 | 2.35 ± 0.06 |