Whole genome sequencing reveals the genetic diversity and structure of Leptosphaeria maculans populations from the Western Cape province of South Africa

Table 3 Summary of population statistics for the genetic diversity in Leptosphaeria maculans populations in the Western cape Province

Location	N	Hexp	MLG	eMLG	MLL	Lambda^{a, b}	E.5^b	\({\bar r_d}\)^b	p.rD
Eendekuil	30	0.0837	30	30	30	1	1	2.71E-04	0,01
Hopefield	50	0.0857	50	30	41	0.9894	0.976	0.00075428	0,01
Langgewens	50	0.0847	50	30	48	0.9984	0.996	8.34E-05	0,01
Napier	37	0.0944	37	30	37	1	1	7.61E-06	0,3
Riversdale	47	0.0943	47	30	47	1	1	3.05E-05	0,01
Tygerhoek	50	0.0939	50	30	49	0.9992	0.998	9.38E-05	0,01

N = number of isolates (sample size); Hexp = Nei’s unbiased gene diversity index; MLG = number of observed multilocus genotypes; eMLG = number of expected MLG at a sample size of 30; MLL = number of observed multilocus lineages using a bitwise cutoff distance of 0.01; lambda = Simpson’s index; E.5 = Evenness; \(\:{\stackrel{-}{r}}_{d}\) = Standarised index of association; p.rD = P-value for \(\:\:{\stackrel{-}{r}}_{d}\), P < 0.05 indicates significant linkage disequilibrium
^aCorrected for sample size; ^b Calculated using clone corrected data

ISSN: 1471-2164