Fig. 8

Comparative analysis of gene regulatory networks and functional enrichment for germination-related genes and heat stress-related genes identified by TransGeneSelector and random forest. a Parallel Plot Illustrating Regulatory Relationships between Germination-related Genes: This segment showcases the MERLIN-derived regulatory links between genes identified by TransGeneSelector and Random Forest. Networks were constructed using datasets unrelated to germination (top) and those related to germination (bottom). Varied line colors signify regulatory relationships stemming from different types of regulators. Relationships labeled with (new) indicate newly emerged regulatory interactions identified within the germination-related dataset-constructed network. b Stacked Percentage Bar Chart of Regulatory Relationships Between Germination-related Genes Identified by TransGeneSelector and Random Forest. c Comparative Results of KEGG Enrichment Analysis for Germination-related Genes Identified by TransGeneSelector and Random Forest. d Parallel Plot Illustrating Regulatory Relationships between Heat stress-related Genes: This segment showcases the MERLIN-derived regulatory links between genes identified by TransGeneSelector and Random Forest. Networks were constructed using datasets unrelated to heat stress (top) and those related to heat stress (bottom). Varied line colors signify regulatory relationships stemming from different types of regulators. Relationships labeled with (new) indicate newly emerged regulatory interactions identified within the heat stress-related dataset-constructed network. e Stacked Percentage Bar Chart of Regulatory Relationships Between Heat stress-related Genes Identified by TransGeneSelector and Random Forest. f Comparative Results of GO Enrichment Analysis for Heat stress-related Genes Identified by TransGeneSelector and Random Forest