Table 1 TPS genes identified in ten Theaceae plants
From: Evolution and amplification of the trehalose-6-phosphate synthase gene family in Theaceae
Species name | Number of Caleosin | Gene name | Subfamily | Num of Exon | Number of Amino Acid | Molecular Weight (Da) | Theoretical pI |
|---|---|---|---|---|---|---|---|
Camellia sinensis var. sinensis cv. Biyun | 11 | By-TPS9 | Clade II-4 | 3 | 833 | 94355.18 | 5.98 |
By-TPS8 | Clade II-4 | 3 | 855 | 96398.52 | 5.82 | ||
By-TPS10 | Clade II-5 | 3 | 862 | 97848.92 | 5.8 | ||
By-TPS4 | Clade II-2 | 3 | 863 | 97318.26 | 5.64 | ||
By-TPS5 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
By-TPS3 | Clade II-1 | 3 | 856 | 97336.75 | 5.65 | ||
By-TPS6 | Clade II-3 | 4 | 749 | 85799.88 | 8.88 | ||
By-TPS2 | Clade I | 13 | 836 | 93838.11 | 8.36 | ||
By-TPS11 | Clade II-5 | 6 | 648 | 73008.86 | 6.41 | ||
By-TPS1 | Clade I | 10 | 493 | 54880.81 | 6.96 | ||
By-TPS7 | Clade II-3 | 2 | 282 | 31189.19 | 5.84 | ||
Camellia nanyongensis | 8 | Col-TPS8 | Clade II-5 | 4 | 860 | 97498.34 | 5.69 |
Col-TPS7 | Clade II-4 | 4 | 863 | 97368.71 | 5.85 | ||
Col-TPS2 | Clade II-1 | 4 | 857 | 97444.95 | 5.76 | ||
Col-TPS1 | Clade II-1 | 4 | 859 | 97681.23 | 5.8 | ||
Col-TPS3 | Clade II-2 | 4 | 857 | 96516.35 | 5.65 | ||
Col-TPS6 | Clade II-3 | 4 | 889 | 100204.52 | 6.02 | ||
Col-TPS5 | Clade II-3 | 3 | 855 | 96590.77 | 6.47 | ||
Col-TPS4 | Clade II-3 | 4 | 746 | 85307.35 | 8.84 | ||
Camellia chekiangoleosa | 11 | Cch-TPS9 | Clade II-4 | 3 | 854 | 96637.61 | 5.82 |
Cch-TPS8 | Clade II-4 | 3 | 855 | 96448.6 | 5.73 | ||
Cch-TPS10 | Clade II-5 | 3 | 862 | 97721.64 | 5.61 | ||
Cch-TPS3 | Clade II-1 | 3 | 856 | 97365.9 | 5.74 | ||
Cch-TPS4 | Clade II-2 | 3 | 865 | 97370.16 | 5.65 | ||
Cch-TPS7 | Clade II-3 | 3 | 855 | 96333.96 | 5.8 | ||
Cch-TPS1 | Clade I | 17 | 944 | 105899.98 | 8.29 | ||
Cch-TPS6 | Clade II-3 | 3 | 855 | 96605.78 | 6.29 | ||
Cch-TPS5 | Clade II-3 | 1 | 706 | 80941.82 | 8.79 | ||
Cch-TPS2 | Clade I | 16 | 939 | 105222.64 | 6.6 | ||
Cch-TPS11 | Clade II-5 | 4 | 685 | 78076.93 | 6.8 | ||
Camellia lanceoleosa | 11 | Cla-TPS1 | Clade I | 17 | 932 | 104988.6 | 7.41 |
Cla-TPS10 | Clade II-4 | 3 | 854 | 96622.65 | 5.91 | ||
Cla-TPS11 | Clade II-5 | 3 | 862 | 97695.62 | 5.65 | ||
Cla-TPS2 | Clade I | 17 | 935 | 104818.97 | 6.52 | ||
Cla-TPS9 | Clade II-4 | 3 | 855 | 96444.64 | 5.77 | ||
Cla-TPS4 | Clade II-1 | 3 | 856 | 97337.85 | 5.74 | ||
Cla-TPS5 | Clade II-2 | 3 | 865 | 97398.21 | 5.7 | ||
Cla-TPS8 | Clade II-3 | 3 | 855 | 96275.88 | 5.75 | ||
Cla-TPS7 | Clade II-3 | 1 | 679 | 77603.41 | 8.49 | ||
Cla-TPS6 | Clade II-3 | 3 | 865 | 98008.91 | 5.62 | ||
Cla-TPS3 | Clade II-1 | 2 | 429 | 48700.57 | 8.47 | ||
wild tea tree DASZ | 7 | DASZ-TPS6 | Clade II-4 | 3 | 854 | 96663.79 | 6.06 |
DASZ-TPS5 | Clade II-4 | 4 | 818 | 92633.59 | 5.82 | ||
DASZ-TPS7 | Clade II-5 | 4 | 916 | 104155.44 | 6.32 | ||
DASZ-TPS4 | Clade II-3 | 3 | 855 | 96216.8 | 5.8 | ||
DASZ-TPS1 | Clade I | 16 | 869 | 97463.5 | 6.74 | ||
DASZ-TPS3 | Clade II-3 | 10 | 868 | 97685.03 | 6.47 | ||
DASZ-TPS2 | Clade II-2 | 7 | 603 | 67473 | 5.38 | ||
Camellia sinensis var. sinensis cv. Huangdan | 9 | Hd-TPS8 | Clade II-4 | 3 | 854 | 96644.74 | 6.03 |
Hd-TPS7 | Clade II-4 | 3 | 855 | 96444.65 | 5.82 | ||
Hd-TPS2 | Clade I | 17 | 935 | 104640.78 | 6.57 | ||
Hd-TPS4 | Clade II-2 | 3 | 863 | 97318.26 | 5.64 | ||
Hd-TPS9 | Clade II-5 | 3 | 862 | 97804.86 | 5.74 | ||
Hd-TPS3 | Clade II-1 | 3 | 856 | 97308.8 | 5.69 | ||
Hd-TPS5 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
Hd-TPS6 | Clade II-3 | 2 | 681 | 78150.06 | 8.53 | ||
Hd-TPS1 | Clade I | 10 | 545 | 60772.17 | 8.37 | ||
Camellia sinensis var. sinensis cv. Longjing-43 | 9 | Lj-TPS1 | Clade I | 17 | 932 | 104904.45 | 7.18 |
Lj-TPS8 | Clade II-4 | 3 | 854 | 96644.74 | 6.03 | ||
Lj-TPS9 | Clade II-5 | 4 | 1048 | 119732.79 | 4.87 | ||
Lj-TPS2 | Clade I | 17 | 935 | 104599.77 | 6.57 | ||
Lj-TPS5 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
Lj-TPS3 | Clade II-1 | 3 | 856 | 97336.75 | 5.65 | ||
Lj-TPS7 | Clade II-3 | 3 | 855 | 96274.83 | 5.75 | ||
Lj-TPS4 | Clade II-2 | 5 | 839 | 94586.25 | 5.37 | ||
Lj-TPS6 | Clade II-3 | 3 | 862 | 97911.74 | 5.36 | ||
Camellia sinensis var. sinensis cv. Shuchazao | 15 | Scz-TPS1 | Clade I | 17 | 932 | 104904.45 | 7.18 |
Scz-TPS13 | Clade II-4 | 3 | 854 | 96644.74 | 6.03 | ||
Scz-TPS12 | Clade II-4 | 3 | 855 | 96398.52 | 5.82 | ||
Scz-TPS11 | Clade II-4 | 3 | 855 | 96444.65 | 5.82 | ||
Scz-TPS15 | Clade II-5 | 3 | 862 | 97875 | 5.8 | ||
Scz-TPS3 | Clade I | 17 | 935 | 104599.77 | 6.57 | ||
Scz-TPS4 | Clade II-1 | 2 | 700 | 80307.6 | 6.65 | ||
Scz-TPS5 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
Scz-TPS10 | Clade II-3 | 3 | 855 | 96274.83 | 5.75 | ||
Scz-TPS9 | Clade II-3 | 3 | 855 | 96274.83 | 5.75 | ||
Scz-TPS2 | Clade I | 18 | 924 | 103413.4 | 6.51 | ||
Scz-TPS7 | Clade II-3 | 3 | 855 | 96580.75 | 6.29 | ||
Scz-TPS6 | Clade II-3 | 3 | 866 | 98147.93 | 5.35 | ||
Scz-TPS8 | Clade II-3 | 4 | 790 | 90210.4 | 7.6 | ||
Scz-TPS14 | Clade II-5 | 5 | 461 | 51849.74 | 8.85 | ||
Camellia sinensis var. sinensis cv. Tieguanyin | 10 | Tgy-TPS1 | Clade I | 17 | 932 | 104904.45 | 7.18 |
Tgy-TPS8 | Clade II-4 | 3 | 854 | 96663.79 | 6.06 | ||
Tgy-TPS7 | Clade II-4 | 3 | 855 | 96447.72 | 5.77 | ||
Tgy-TPS2 | Clade I | 17 | 935 | 104640.78 | 6.57 | ||
Tgy-TPS10 | Clade II-5 | 3 | 862 | 97862.99 | 5.84 | ||
Tgy-TPS4 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
Tgy-TPS3 | Clade II-1 | 3 | 856 | 97350.78 | 5.65 | ||
Tgy-TPS6 | Clade II-3 | 3 | 855 | 96540.69 | 6.32 | ||
Tgy-TPS5 | Clade II-3 | 3 | 842 | 95441.93 | 5.54 | ||
Tgy-TPS9 | Clade II-5 | 6 | 596 | 66845.83 | 7.03 | ||
Camellia sinensis var. assamica cv. Yunkang-10 | 11 | Yk-TPS1 | Clade I | 17 | 932 | 104904.45 | 7.18 |
Yk-TPS9 | Clade II-4 | 3 | 854 | 96669.79 | 6.06 | ||
Yk-TPS8 | Clade II-4 | 3 | 771 | 87668.81 | 5.89 | ||
Yk-TPS2 | Clade I | 18 | 951 | 106343.73 | 6.57 | ||
Yk-TPS11 | Clade II-5 | 3 | 862 | 97751.76 | 5.75 | ||
Yk-TPS4 | Clade II-2 | 3 | 865 | 97429.23 | 5.7 | ||
Yk-TPS3 | Clade II-1 | 4 | 858 | 97618.11 | 5.61 | ||
Yk-TPS7 | Clade II-3 | 3 | 855 | 96273.85 | 5.8 | ||
Yk-TPS6 | Clade II-3 | 3 | 855 | 96582.77 | 6.32 | ||
Yk-TPS5 | Clade II-3 | 6 | 1005 | 113311.27 | 5.23 | ||
Yk-TPS10 | Clade II-5 | 5 | 461 | 51879.76 | 9.04 | ||
Arabidopsis thaliana | 11 | AtTPS5 | Clade II-2 | 3 | 862 | 97454.49 | 5.76 |
AtTPS8 | Clade II-4 | 3 | 856 | 97561.18 | 5.6 | ||
AtTPS1 | Clade I | 17 | 942 | 105975.73 | 6.7 | ||
AtTPS10 | Clade II-4 | 3 | 861 | 97324.38 | 6.16 | ||
AtTPS9 | Clade II-4 | 3 | 867 | 98495.79 | 5.92 | ||
AtTPS11 | Clade II-5 | 3 | 862 | 98275.23 | 6.96 | ||
AtTPS2 | Clade I | 17 | 822 | 93004.88 | 5.61 | ||
AtTPS6 | Clade II-1 | 3 | 860 | 97703.22 | 5.9 | ||
AtTPS7 | Clade II-3 | 3 | 851 | 96688.46 | 5.59 | ||
AtTPS4 | Clade I | 17 | 795 | 89474.44 | 6.09 | ||
AtTPS3 | Clade I | 17 | 783 | 89466.57 | 7.34 | ||
Oryza sativa | 11 | OsTPS1 | Clade I | 17 | 980 | 108425.95 | 6.22 |
OsTPS10 | Clade II-1 | 3 | 885 | 99445.48 | 5.83 | ||
OsTPS4 | Clade II-1 | 3 | 860 | 96634.66 | 5.76 | ||
OsTPS11 | Clade II-4 | 3 | 863 | 97809.63 | 5.96 | ||
OsTPS6 | Clade II-3 | 3 | 899 | 100533.68 | 5.48 | ||
OsTPS7 | Clade II-4 | 3 | 862 | 97645.3 | 6.19 | ||
OsTPS2 | Clade II-3 | 3 | 913 | 102269.72 | 5.37 | ||
OsTPS3 | Clade II-3 | 3 | 878 | 99392.68 | 5.5 | ||
OsTPS5 | Clade II-5 | 3 | 847 | 93883.35 | 6.71 | ||
OsTPS8 | Clade II-5 | 3 | 824 | 91504.41 | 5.76 | ||
OsTPS9 | Clade II-5 | 3 | 886 | 96286.41 | 7.38 |