Table 2 List of genes located in RXf1 region from two haploids

Haplotype 1

 Fa.00g771080.m01

Threonine–tRNA ligase, mitochondrial-like (LOC101306153), transcript variant X3

 Fa.00g771090.m01

Protein ENHANCED DISEASE RESISTANCE 2 (LOC101306446), transcript variant X2

 Fa.00g771100.m01

Rosa chinensis protein FAR1-RELATED SEQUENCE 5 (LOC112194297), transcript variant X3

 Fa.00g771120.m01

SNF1-related protein kinase catalytic subunit alpha KIN10 (LOC101307030)

 Fa.00g771130.m01

SNF1-related protein kinase catalytic subunit alpha KIN10 (LOC101307030)

 Fa.00g771140.m01

Endo-1,3(4)-beta-glucanase 2-like (LOC101314783)

 Fa.00g771150.m01

Rosa chinensis putative endo-1,3(4)-beta-glucanase 2 (LOC112186895)

 Fa.00g771160.m01

Fragaria x ananassa transcription factor ERF42

 Fa.00g771170.m01

CSC1-like protein HYP1 (LOC101307320)

 Fa.00g771180.m01

Vesicle transport v-SNARE 13 (LOC101307608)

 Fa.00g771220.m01

Probable disease resistance protein At4g27220 (LOC101303577), transcript variant X3

 Fa.00g771230.m01

Pentatricopeptide repeat-containing protein At5g15280-like (LOC101293811)

 Fa.00g771260.m01

B3 domain-containing transcription factor LEC2-like (LOC101298714), transcript variant X2

 Fa.00g771300.m01

Putative F-box protein At4g22170 (LOC101304316), transcript variant X1

 Fa.00g771380.m01

Uncharacterized LOC101301069 (LOC101301069), transcript variant X5

Haplotype 2

 Fa.00g675590.m01

Putative proline–tRNA ligase C19C7.06 (LOC101307525)

 Fa.00g675600.m01

Membrane-anchored ubiquitin-fold protein 1 (LOC101300166), transcript variant X4

 Fa.00g675610.m01

Probable galacturonosyltransferase 14 (LOC101299885), transcript variant X2

 Fa.00g675620.m01

Nucleosome assembly protein 1;3-like (LOC101307238), transcript variant X5

 Fa.00g675630.m01

Nucleosome assembly protein 1;3-like (LOC101307238), transcript variant X5

 Fa.00g675640.m01

Uncharacterized LOC105352885 (LOC105352885), transcript variant X3

 Fa.00g675670.m01

Rosa chinensis tyrosine–tRNA ligase 1, cytoplasmic (LOC112184062)

 Fa.00g675680.m01

25.3 kDa vesicle transport protein-like (LOC101298530)

 Fa.00g675690.m01

DNA-directed RNA polymerase I subunit rpa49-like (LOC101306367)

 Fa.00g675700.m01

BAG family molecular chaperone regulator 8, chloroplastic (LOC101298238)

 Fa.00g675730.m01

Uncharacterized LOC101305788 (LOC101305788)

 Fa.00g675740.m01

U5 small nuclear ribonucleoprotein 200 kDa helicase-like (LOC101305204)

 Fa.00g675990.m01

Uncharacterized LOC101297658 (LOC101297658), transcript variant X3

 Fa.00g676000.m01

40S ribosomal protein S9-2 (LOC101295733)