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Fig. 3 | BMC Genomics

Fig. 3

From: Host transcriptome response to Mycoplasma bovis and bovine viral diarrhea virus in bovine tissues

Fig. 3

Volcano plots of differentially expressed genes (DEGs) between (A) Control vs Dual and (B) M. bovis (MB) vs Dual in liver, whole blood cell (WBC), mesenteric lymph node (MLN), tracheal-bronchial lymph node (TBLN), spleen, and thymus. The x-axis indicates log2 foldchange and the y-axis indicates -log10 adjusted p-value for each DEG. DEGs with an adjusted p-value < 0.05 were deemed significant. Upregulated DEGs are shown in blue. Downregulated DEGs are shown in red. Non-significant genes are shown in grey. SLC45A3 = solute carrier family 45 member 3; ISM1 = isthmin 1; PTPRO = protein tyrosine phosphatase receptor type O; IFI6 = interferon alpha inducible protein 6; FADS1 = fatty acid desaturase 1; ARSG = arylsulfatase G; TMEM119 = transmembrane protein 119; SCD = stearoyl-CoA desaturase; DGAT2 = diacylglycerol O-acyltransferase 2; OAS2 = 2’-5’-oligoadenylate synthetase 2; IFI27 = interferon alpha inducible protein 27; AICDA = activation induced cytidine deaminase; ARL5C = ARF like GTPase 5 C; STMN3 = stathmin 3; CCL14/16 = chemokine ligand 14/16; COL15A1 = collagen type XV alpha 1 chain; HSPG2 = heparan sulfate proteoglycan 2; COL4A2 = collagen type IV alpha 2 chain; C3 = complement C3

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