Sexually dimorphic gene expression responses of bovine embryos to the maternal microenvironment on day 13 of gestation

Salilew-Wondim, Dessie; Tholen, Ernst; Große-Brinkhaus, Christine; Held-Hoelker, Eva; Miskel, Dennis; Rings, Franca; Schellander, Karl; Besenfelder, Urban; Havlicek, Vitezslav; Tesfaye, Dawit; Hoelker, Michael

doi:10.1186/s12864-025-11570-5

Table 5 The upregulated (↑) or downregulated (↓) genes in both CM vs. CF and HM vs. HF comparisons

From: Sexually dimorphic gene expression responses of bovine embryos to the maternal microenvironment on day 13 of gestation

			CM vs. CF			HM vs. HF
Gene symbol	Ensembl gene id	Chr	P value	FDR	Expression patterns	P value	FDR	Expression patterns
IRS4	ENSBTAG00000006535	X	< 0.001	0.025	↑	< 0.001	0.021	↑
PLS3	ENSBTAG00000011613	X	< 0.001	0.000	↑	< 0.001	0.000	↑
SCN3 A	ENSBTAG00000019385	2	0.001	0.094	↑	< 0.001	0.003	↑
SLC30 A10	ENSBTAG00000004414	16	< 0.001	0.014	↑	0.001	0.097	↑
NUDT10	ENSBTAG00000054383	X	< 0.001	0.060	↑	< 0.001	0.001	↑
ARHGEF10	ENSBTAG00000008585	27	< 0.001	0.068	↑	0.001	0.093	↑
SLC10 A4	ENSBTAG00000004888	6	< 0.001	0.015	↑	< 0.001	0.024	↑
TIMM8 A	ENSBTAG00000022292	X	< 0.001	0.018	↓	0.001	0.091	↓
ATP6 AP1	ENSBTAG00000012117	X	< 0.001	0.013	↓	< 0.001	0.042	↓
KDM5 C	ENSBTAG00000014943	X	< 0.001	0.003	↓	< 0.001	0.025	↓
DNASE1L1	ENSBTAG00000007455	X	< 0.001	0.061	↓	< 0.001	0.012	↓
ENSBTAG00000022275	ENSBTAG00000022275	1	< 0.001	0.001	↓	< 0.001	0.008	↓
MOSPD2	ENSBTAG00000018292	X	< 0.001	0.087	↓	< 0.001	0.024	↓
RAB9 A	ENSBTAG00000010923	X	< 0.001	0.001	↓	< 0.001	0.049	↓
ENSBTAG00000005239	ENSBTAG00000005239	2	< 0.001	0.001	↓	< 0.001	0.049	↓
TRAPPC2	ENSBTAG00000010922	X	< 0.001	0.010	↓	< 0.001	0.001	↓
ATP2 C2	ENSBTAG00000000945	18	0.001	0.081	↓	< 0.001	0.060	↓
RAB33 A	ENSBTAG00000034712	X	< 0.001	0.058	↓	< 0.001	0.002	↓
IKBKG	ENSBTAG00000006268	X	< 0.001	0.000	↓	< 0.001	0.014	↓
RNF113 A	ENSBTAG00000006034	X	< 0.001	0.014	↓	< 0.001	0.016	↓
ABHD4	ENSBTAG00000016658	10	< 0.001	0.007	↓	< 0.001	0.035	↓
LAS1L	ENSBTAG00000002210	X	< 0.001	0.000	↓	0.001	0.065	↓
MPP1	ENSBTAG00000013046	X	< 0.001	0.000	↓	0.001	0.073	↓
PIGA	ENSBTAG00000007646	X	< 0.001	0.082	↓	0.001	0.073	↓
ENSBTAG00000052866	ENSBTAG00000052866	3	< 0.001	0.044	↓	0.001	0.087	↓
SYN1	ENSBTAG00000005042	X	< 0.001	0.020	↓	< 0.001	0.029	↓
PRXL2 A	ENSBTAG00000021416	28	< 0.001	0.057	↓	0.001	0.075	↓
HAND1	ENSBTAG00000002335	7	< 0.001	0.016	↓	< 0.001	0.000	↓
TKDP1	ENSBTAG00000018122	13	< 0.001	0.022	↓	< 0.001	0.009	↓
TBX2	ENSBTAG00000014278	19	< 0.001	0.010	↓	< 0.001	0.000	↓
TMEM102	ENSBTAG00000031737	19	< 0.001	0.000	↓	< 0.001	0.000	↓
ABCG2	ENSBTAG00000017704	6	< 0.001	0.027	↓	< 0.001	0.037	↓
SRARP	ENSBTAG00000010938	2	< 0.001	0.003	↓	< 0.001	0.006	↓
PINLYP	ENSBTAG00000001260	18	< 0.001	0.018	↓	< 0.001	0.003	↓
CDKN1 C	ENSBTAG00000031184	29	< 0.001	0.013	↓	0.000	0.003	↓
TKDP4	ENSBTAG00000013950	13	< 0.001	0.003	↓	0.000	0.000	↓
C15H11orf96	ENSBTAG00000045822	15	< 0.001	0.001	↓	0.000	0.023	↓
DHRS9	ENSBTAG00000004557	2	< 0.001	0.002	↓	0.000	0.013	↓

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ISSN: 1471-2164

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