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Table 3 Chromosome-scale scaffold accessions and attributes

From: Chromosome-scale scaffolds of the fungus gnat genome reveal multi-Mb-scale chromosome-folding interactions, centromeric enrichments of retrotransposons, and candidate telomere sequences

Chromosome

GenBank

GC Contenta

# Genes (Maker2)b

# Genes (RefSeq)b

X

CM025456.2

35.0

4,797

3,146

II

CM025453.2

36.1

4,144

3,214

III

CM025454.2

35.7

6,213

4,426

IV

CM025455.2

35.6

7,126

5,340

Bcop_v2c

GCA_014529535.2

35.5

23,115

16,542

  1. aGC computed using only A, C, G, T, and the sum of these 4 bases. N-content was ignored and its length not used in the sum
  2. b # protein-coding genes lifted over from Bcop_v1 assembly
  3. c Includes unplaced associated assembly sequences as well as the four chromosome scaffolds
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BMC Genomics

ISSN: 1471-2164

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