Temperature-induced variation in the transcriptome of maritime pine (Pinus pinaster Ait.) embryogenic masses modulates the phenotype of the derived plants

Table 1 General statistics of number of Raw sequences, clean Reads, and mapped reads against the de Novo transcriptome of maritime pine embryonal-suspensor masses maturating at different temperatures

Genotype	Maturation temp. (˚C)	Raw reads	Clean reads	% Clean read (q > 30)	Mapped reads	% Mapped
1058P4c	18	40,150,641	40,146,887	92.7	35,297,813	87.9
	23	37,802,613	37,800,448	92.8	33,259,627	88.0
	28	33,337,959	33,330,015	92.6	29,175,723	87.5
1046P1c	18	37,028,524	37,025,709	93.1	32,252,468	87.1
	23	30,667,851	30,666,528	91.5	27,171,306	88.6
	28	31,028,680	31,023,497	92.4	27,291,159	88.0
1007P3a	18	35,842,315	35,840,580	92.1	31,584,819	88.1
	23	38,929,841	38,927,801	92.4	34,447,670	88.5
	28	34,754,864	34,751,970	92.2	30,649,883	88.2

ISSN: 1471-2164