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Table 2 Analysis of molecular variance (AMOVA) using Y-SNPs and Y-STRs

From: Exploring Y-chromosomal STRs and SNPs for forensic and genetic insights in the Jiangsu Han population

 

Classification criterion

Total variation (%)

Fixation indices

(p value)

Y-SNPs

Among groups

3.08

FCT=0.03082

0.02737

Among populations within groups

3.08

FSC=0.03177

0.00000

Within population

93.84

FST=0.06161

0.00000

Y-STRs

Among groups

-0.12

FCT= -0.00119

-0.67644

Among populations within groups

1.22

FSC=0.01216

0.00000

Within populations

98.90

FST=0.01099

0.00000

  1. Geographic Partitioning (three groups). (1) Jiangsu Han. (2) Southern Han. (3) Northern Han. FSC=variance among populations within groups; FST=variance within population; FCT=variance among groups. AMOVA test for Y-STR was based on 17 STR loci