Fig. 3

Dotplot Analysis of 16 Assembled Contigs. (A) Squares are a visual comparison of all pairwise combinations of the 16 assembled contigs. (B) Enlarged dot plots comparing contig one with contigs one through eight, representative plots enable better visualization of the linear relationship between contigs. Solid diagonal blue lines indicate the sequences have the same start and end sites, are highly similar, and do not contain any large gaps or rearrangements. The solid diagonal red lines indicate the sequences are the reverse of one another, are highly similar, and do not contain large gaps or rearrangements